Protein Information

Protein ZmMYB104
ZmMYB104 is a protein in the MYB family.
Information
TF Name:	ZmMYB104
Species:	Maize
TF Family:	MYB
Gene Name(Synonym):	MYB104
Uniprot ID:	Q9SQA3
Subgenome:	1

Overview of domains present in v5 transcripts
	PF00249	PF13921
Zm00001eb074810_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d002750	DAPseq	sequence	fimo	position
Zm00001d002750	DAPseq	sequence	fimo	position
Zm00001d002750	ChIPseq	sequence	fimo	position
Zm00001d002750	PChIPseq	sequence	fimo	position

Zm00001eb074810_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MARPPGGARRRGGGSGRRDAAGGCEAVRKGHWTAEEDGVLLEHVRVHGPRDWSFIRSKGLLPRTGKSCRLRWVNKLRPDL
KTGCKFSAEEERVVLELQAQFGNKWARIATYLPGRTDNDVKNFWSTRQKRLARLLGTPIRRRQSSRSRSAKAPVASSLKS
RPATVVKPSQVPCLDQVPLEGSSTGVHPCSAGAATPFMDAHSISAALAPYDWAGSGLASSDGALPLASDIHACSSSNAAA
LPPLLPFDQPPCTELGFPGLPAGWNMAPGFDNVGTMDHLAYQELLPVTQPAPMMLPFFGTEYLHGGAKAELPDAGPDYFF
DDLPPDMFDSLDQPPRPLSPPATS

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF00249
PF13921
PF00249
PF13921
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Nucleotide Sequence
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CTCCATCTCTGGCAGCGCCCCCTGG...

GRMZM2G105137_T01 from maize genome v3

Related TFome: pUT4025

Amino Acid Sequence
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MARPPGGARRRGGGSGRRDAAGGCEAVRKGHWTAEEDGVLLEHVRVHGPRDWSFIRSKGLLPRTGKSCRLRWVNKLRPDL
KTGCKFSAEEERVVLELQAQFGNKWARIATYLPGRTDNDVKNFWSTRQKRLARLLGTPIRRRQSSRSRSAKAPVASSLKS
RPATVVPCLDQVPLEGSSTGVHPCSAGAATPFMDAHSISAALAPYDWAGSGLASSDGALPLASDIHACSSSNAAALPPLL
PFDQPPCTELGFPGLPAGWNMAPGFDNVGTMDHLAYQELLPVTQPAPMMLPFFGTEYLHGGAKAELPDAGPDYFFDDLPP
DMFDSLDQPPRPLSPPATS

Nucleotide Sequence
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ATGGCTCGACCACCTGGCGGCGCCC...

Zm00001d002750_T001 from maize genome v4

Amino Acid Sequence
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MARPPGGARRRGGGSGRRDAAGGCEAVRKGHWTAEEDGVLLEHVRVHGPRDWSFIRSKGLLPRTGKSCRLRWVNKLRPDL
KTGCKFSAEEERVVLELQAQFGNKWARIATYLPGRTDNDVKNFWSTRQKRLARLLGTPIRRRQSSRSRSAKAPVASSLKS
RPATVVKPSQVPCLDQVPLEGSSTGVHPCSAGAATPFMDAHSISAALAPYDWAGSGLASSDGALPLASDIHACSSSNAAA
LPPLLPFDQPPCTELGFPGLPAGWNMAPGFDNVGTMDHLAYQELLPVTQPAPMMLPFFGTEYLHGGAKAELPDAGPDYFF
DDLPPDMFDSLDQPPRPLSPPATS

Nucleotide Sequence
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CGCATCGCTCTCCCGGAACACTTGT...

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Protein ZmMYB104

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmMYB104 is the regulator

Interactions where ZmMYB104 is the target
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Zm00001eb074810_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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GRMZM2G105137_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d002750_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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